On the printed character sheet, domain slots are not reported in the total spell counts for clerics and druids.
Example for a third level cleric (with 18 WIS) the sheet reports:
4x0, 3x1, 2x2
It really should be: 4x0, 3x1+1, 2x2+1
It is reported properly on the character screens but left off of the output sheet.
I've added this to my to-do list, thanks for the report.