The PDFs, when purchased from Green Ronin or one of their affiliates, include HeroLab files. I will admit that the Superteam one was pretty disappointing in how they didn't include the new Advantages as anything other than a "Custom" one. A few of us wrote them up properly and offered it to Lone Wolf, but have received no word.
I miss the days when we'd just directly email Colen with updated files.