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On each of the custom abilities, the second option "Available to Classes" is where that custom ability is marked as belonging to a specific class (or in this case, a specific archetype) - so, when you make the custom abilities that are available to this archetype (you'll probably be able to start by making copies of the totem transformations that are already there), you'll assign them as belonging to the Leopard Shaman archetype.
On each of the animal shaman archetypes, you'll see that the "Additional Minion" option (which is supposed to be named "Additional Minion Restrictions") is set. So, for your new archetype, you'll want to create a new list there, specifically for the leopard shaman.
Then, on the Race, Anim Comp tab, make a copy of any animal companion races you want to add to this archetype's allowed list. Each of those will have a "Minion Allowed For?" option - you'll add the Leopard Shaman to the list of things that are allowed to take this companion, then you'll make this animal companion a replacement for what was already there by entering the old Unique Id of the race you're copying into the "replaces thing Id" box on the center-right of the screen.
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