I can duplicate the advanced stabilization error using 1.01b, freshly downloaded from ab40k.org - it happens for a lone commander with AdvSS, and goes away when he has a bodyguard who also has AdvSS, so I think the validation isn't checking for unit size = 1 properly.
As to the ethereal error, tau Empire, pg. 32 - note that the title of the tau commander says "1+ Commander" - so you need one of those in all Tau armies, even if an ethereal is filling your second HQ slot.
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